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alphafold-sovereign-mcp

alphafold-sovereign-mcp is a MCP server by smaniches that alphaFold DB and other public biomedical sources in a local SQLite knowledge graph for structure confidence, variants, diseases, drug targets and orthology.

Updated 2026-10-15

What is alphafold-sovereign-mcp?

alphafold-sovereign-mcp is a MCP server by smaniches that alphaFold DB and other public biomedical sources in a local SQLite knowledge graph for structure confidence, variants, diseases, drug targets and orthology. It is listed under Other and has 4 GitHub stars.

TypeMcp server
Authorsmaniches
Repositorysmaniches/alphafold-sovereign-mcp
Popularity4 GitHub stars
CategoryOther
SecurityLow risk (84/100)
Rank#2,281 of 4,418 MCP servers; #351 in Other
LicenseApache-2.0
Last commit2026-10-15
RunsLocally and in the cloud
LanguagePython
PlatformsmacOS, Windows, Linux

Is alphafold-sovereign-mcp safe to install?

alphafold-sovereign-mcp scores 84/100 on the MCPMods security check: Low risk. Things to review: sends your data to a cloud service. It passed 4 of 6 checks.

MCP server results come from listing signals: who publishes it, where your data goes and what it can do. The code itself is not scanned yet.

CheckResult
Community-built serverNote
Sends your data to a cloud serviceReview
No credentials mentionedPass
Read-only by descriptionPass
No code executionPass
Source on GitHubPass

How do I install alphafold-sovereign-mcp?

  1. Find the launch command. The README says how the server starts (npx, uvx, docker or a remote URL) and which API keys it needs.
    https://github.com/smaniches/alphafold-sovereign-mcp
  2. Add it to Claude Code. Replace the part after -- with the command from the README. Remote servers use --transport http with a URL.
    claude mcp add alphafold-sovereign-mcp -- <command from README>
    claude mcp add --transport http alphafold-sovereign-mcp <server-url>
  3. Check it connected. This lists your MCP servers and their status.
    claude mcp list

Or ask Claude to set it up

Paste this into Claude Code and it installs alphafold-sovereign-mcp for you:

Add the "alphafold-sovereign-mcp" MCP server from https://github.com/smaniches/alphafold-sovereign-mcp to Claude Code. Read its README for the launch command and any API keys I need, run claude mcp add, then check that it connects.