What is noodle-mcp?
noodle-mcp is a MCP server by helena-bioinformatics that read-only biomedical literature search over a PubMed-derived corpus by natural language or PMID/DOI/PMCID, with citation and semantic graph traversal. It is listed under Other and has no public popularity data yet.
| Type | Mcp server |
|---|---|
| Author | helena-bioinformatics |
| Repository | helena-bioinformatics/noodle-mcp |
| Popularity | no public popularity data yet |
| Category | Other |
| Security | Low risk (84/100) |
| Rank | #3,766 of 4,418 MCP servers; #591 in Other |
| License | Apache-2.0 |
| Last commit | 2026-09-01 |
| Runs | Cloud service |
| Language | Python |
Is noodle-mcp safe to install?
noodle-mcp scores 84/100 on the MCPMods security check: Low risk. Things to review: sends your data to a cloud service. It passed 4 of 6 checks.
MCP server results come from listing signals: who publishes it, where your data goes and what it can do. The code itself is not scanned yet.
| Check | Result |
|---|---|
| Community-built server | Note |
| Sends your data to a cloud service | Review |
| No credentials mentioned | Pass |
| Read-only by description | Pass |
| No code execution | Pass |
| Source on GitHub | Pass |
How do I install noodle-mcp?
- Find the launch command. The README says how the server starts (npx, uvx, docker or a remote URL) and which API keys it needs.
https://github.com/helena-bioinformatics/noodle-mcp
- Add it to Claude Code. Replace the part after -- with the command from the README. Remote servers use --transport http with a URL.
claude mcp add noodle-mcp -- <command from README> claude mcp add --transport http noodle-mcp <server-url>
- Check it connected. This lists your MCP servers and their status.
claude mcp list
Or ask Claude to set it up
Paste this into Claude Code and it installs noodle-mcp for you:
Add the "noodle-mcp" MCP server from https://github.com/helena-bioinformatics/noodle-mcp to Claude Code. Read its README for the launch command and any API keys I need, run claude mcp add, then check that it connects.