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plant-genomics-mcp

plant-genomics-mcp is a MCP server by musharna that plant genomics locus lookup across Ensembl Plants, Phytozome, UniProtKB, KEGG, STRING-DB, NCBI BLAST and more, with batch and cross-source queries.

Updated 2026-10-18

What is plant-genomics-mcp?

plant-genomics-mcp is a MCP server by musharna that plant genomics locus lookup across Ensembl Plants, Phytozome, UniProtKB, KEGG, STRING-DB, NCBI BLAST and more, with batch and cross-source queries. It is listed under Other and has 7 GitHub stars.

TypeMcp server
Authormusharna
Repositorymusharna/plant-genomics-mcp
Popularity7 GitHub stars
CategoryOther
SecurityLow risk (96/100)
Rank#1,928 of 4,418 MCP servers; #293 in Other
LicenseMIT
Last commit2026-10-18
RunsLocally
LanguagePython
PlatformsmacOS, Windows, Linux

Is plant-genomics-mcp safe to install?

plant-genomics-mcp scores 96/100 on the MCPMods security check: Low risk. No checks raised a concern. It passed 5 of 6 checks.

MCP server results come from listing signals: who publishes it, where your data goes and what it can do. The code itself is not scanned yet.

CheckResult
Community-built serverNote
Runs on your machine onlyPass
No credentials mentionedPass
Read-only by descriptionPass
No code executionPass
Source on GitHubPass

How do I install plant-genomics-mcp?

  1. Find the launch command. The README says how the server starts (npx, uvx, docker or a remote URL) and which API keys it needs.
    https://github.com/musharna/plant-genomics-mcp
  2. Add it to Claude Code. Replace the part after -- with the command from the README. Remote servers use --transport http with a URL.
    claude mcp add plant-genomics-mcp -- <command from README>
    claude mcp add --transport http plant-genomics-mcp <server-url>
  3. Check it connected. This lists your MCP servers and their status.
    claude mcp list

Or ask Claude to set it up

Paste this into Claude Code and it installs plant-genomics-mcp for you:

Add the "plant-genomics-mcp" MCP server from https://github.com/musharna/plant-genomics-mcp to Claude Code. Read its README for the launch command and any API keys I need, run claude mcp add, then check that it connects.